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Can Cas3 power a COVID/flu POCT?

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CONAN uses type I CRISPR-Cas3 collateral ssDNA cleavage for rapid (~40 min), low-cost, instrument-free SARS-CoV-2 detection and IAV single-base discrimination.

Source

CRISPR-Cas3-based diagnostics for SARS-CoV-2 and influenza virus

Yoshimi K, Takeshita K, Yamayoshi S, et al. · iScience · 2022

doi.org/10.1016/j.isci.2022.103830Read the full paper ↗53 citationscc by

What they did

Demonstrated target-activated nonspecific ssDNA cleavage by E. coli type I CRISPR-Cas3, then built CONAN combined with isothermal amplification for instrument-free readout on SARS-CoV-2 and influenza targets.

What they found

CONAN detected SARS-CoV-2 in clinical samples and specifically resolved single-base-pair mutations in IAV variants, positioning Cas3 alongside Cas12 DETECTR and Cas13 SHERLOCK as a CRISPR-dx option for hospital POCT.

The limits

What it doesn't show

Not a large multi-site regulatory trial; real-world sensitivity/specificity vs PCR across variants still need broader clinical evaluation.

Key terms

CONAN
Cas3-Operated Nucleic Acid detectioN diagnostic platform.
Collateral cleavage
Target-activated nonspecific cutting of reporter ssDNA.
CRISPR-dx
CRISPR-based diagnostic assays (e.g., DETECTR, SHERLOCK, CONAN).
Isothermal amplification
Nucleic-acid amp (e.g., RPA/LAMP) without thermal cycling.
POCT
Point-of-care testing near the patient.

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Research intelligence for this paper

See its role on concept claims, tensions it is part of, placement history, and related discoveries.

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Quiz yourself

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CONAN is based on which CRISPR effector class emphasis?

Common questions

Assay name?

CONAN (Cas3-Operated Nucleic Acid detectioN).

Speed claim?

Rapid detection within about 40 minutes.

Pathogens highlighted?

SARS-CoV-2 and influenza A variants.

Special IAV capability?

Single-base-pair mutation discrimination.