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Why do immune genes keep evolving across tetrapods?

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Shared positive selection in birds and mammals concentrates on immune—especially antiviral—genes, implicating pathogens as a consistent selective pressure.

Source

Immune genes are hotspots of shared positive selection across birds and mammals

Shultz AJ, Sackton TB · eLife · 2019

doi.org/10.7554/elife.41815Read the full paper ↗137 citationscc by

Study at a glance

Design
Computational / modelling — Positive-selection scans of avian orthologs with comparison to mammalian selection patterns
N
N=39 · 39 bird species; up to 11,231 genes analysed (gene-tree models)
Population
Bird genomes (compared with mammal orthologs)
Outcome
Shared positive selection on immune genes across birds and mammals

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Why do immune genes keep evolving across tetrapods?

These passages occur verbatim in the stored paper text. They support the points listed below; they do not verify every statement in the explanation.

14% of analyzed genes under positive selection in all tests.

In total, 14% of analyzed genes are found to be under positive selection in all tests (, Table 2 (raw gene tree results), Table 3 (raw species tree results)).

What do shared positive-selection signatures match?

shared signatures of positive selection are consistent with pathogen-mediated selection.
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What they did

Authors scanned orthologous genes across birds (and compared to mammals) for positive selection, then linked selected genes to pathogen-responsive transcriptomes.

What they found

Immune pathways are recurrent selection targets; genes selected in birds are enriched for selection in mammals, especially viral-response genes. About 14% of genes are selected in all tests.

The limits

What it doesn't show

Shared selection could reflect convergence or ancient shared pressure; finer tetrapod clades still need scanning.

Key terms

Positive selection
Natural selection favoring amino-acid changes.
Orthologues
Genes in different species descended from a common ancestor.
Pathogen-mediated selection
Host evolution driven by infectious agents.
Immune hotspots
Gene classes repeatedly targeted by selection across taxa.
Viral response genes
Host genes induced by or interacting with viruses.

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Most consistent selective pressure claimed:

Common questions

What selective pressure looks most consistent?

Pathogens, especially viruses.

Do bird-selected genes matter in mammals?

Yes—they are more likely selected and immune/viral enriched.

How often are genes selected in all tests?

About 14%.

Do transcriptomes support this?

Pathogen-upregulated genes are enriched for selection.

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