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Shared class A GPCR activation path

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Class A GPCRs share a conserved residue-contact rearrangement pathway from ligand pocket to G-protein site.

Source

Common activation mechanism of class A GPCRs

Zhou Q, Yang D, Wu M, et al. · eLife · 2019

doi.org/10.7554/elife.50279Read the full paper ↗560 citationscc by

Study at a glance

Design
Computational / modelling — Residue–residue contact score comparison across inactive and active Class A GPCR structures
N
N=169 · 142 inactive and 27 active structures compared
Population
Class A GPCR crystal/cryo-EM structures
Outcome
Conserved 34-residue-pair activation contact pathway

Structured fields used in claim comparison tables when every cited study has a complete layer.

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Shared class A GPCR activation path

These passages occur verbatim in the stored paper text. They support the points listed below; they do not verify every statement in the explanation.

34 residue pairs in the pathway.

The pathway is comprised of 34 residue pairs (formed by 35 residues) with conserved rearrangement of residue contacts

142 inactive and 27 active structures compared.

family-wide comparison of the RRCS for the 142 inactive and 27 active state structures shows a statistically significant difference (p<0.001; two sample t -test).
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What they did

Quantified residue–residue contact scores across inactive/active structures and identified conserved switching/repacking contacts.

What they found

A 34-residue-pair pathway across layers; comparisons used 142 inactive and 27 active structures (p<0.001).

The limits

What it doesn't show

Does not replace ligand-specific pharmacology for every receptor.

Key terms

GPCR
G protein–coupled receptor.
Class A
Largest rhodopsin-like GPCR family.
RRCS
Residue–residue contact score.
Transmission switch
Conserved contact set linking pocket to core.
Microswitch
Local motif rewiring during activation.
Active vs inactive
Conformational states relative to G-protein coupling.

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Residue pairs:

Common questions

Pathway size?

34 residue pairs (35 residues).

Inactive structures?

142.

Active structures?

27.

First common step?

Transmission switch + Na⁺ pocket changes.

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