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Natural selection

How do Sinocyclocheilus genomes record cave life?

Yang J, Chen X, Bai J, et al. · BMC biology · 2016

Open access · cc by · source: Europe PMC

Sinocyclocheilus cavefish genomes reveal troglomorphic adaptations such as eye degeneration and albinism, paralleling and differing from Astyanax.

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How do Sinocyclocheilus genomes record cave life?

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What adaptation context is studied?

adaptation to dark subterranean life among other groups of distinct but closely-related cavefishes.

What characters puzzle biologists?

biologists have long puzzled over these troglomorphic characters []
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Key findings

Genomic/transcriptomic signatures of eye degeneration and pigmentation loss; some mechanisms differ from Astyanax; constructive cave traits also suggested.

Methodology

Sequenced cave/surface Sinocyclocheilus genomes and compared gene content/expression for cave-related traits.

Limitations

Does not prove a single universal cave-adaptation gene across all fish.

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